Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015800675.1_cds_XP_016471042.1_6298
CDS Infomation

[gene=LOC107793232] [db_xref=GeneID:107793232] [protein=probable galacturonosyltransferase 15 isoform X2] [protein_id=XP_016471042.1] [location=join(50749..50904,52576..53157,53270..53572,53958..54245)] [gbkey=CDS]
Sequence

ATGCTGGCATTGGTGGAGGCAACAAGTGATGGTGAGAATGGAAAAGGAGGGATAGAGAGT
TCAACTTCATTACCATCCTCATTCAATGATCTTGTGAAGGACATGACCTCTAGTGGACAA
GACATCAAAGCTTTCGCTTTCAAAACTAAAGCTATGATAGTGAAGATGGAGAAATTGGTA
GAATCAGCTAGACAACGTGAGTCTATTTTCTGGCATTTAGCTTCTCACGGTGTACCAAAG
GGCATACATTGCCTATCTCTCAAGTTAGCTGAAGAATATGCTGAAAATGCTGCCGCACGT
TCTCGCTTGCCTCCCCCTCAATATGTTTCACGCCTCACTGACCCTTCCTTCCATCACGTA
GTTCTTTTAACAGACAATGTACTTGCTGCGTCTGTTGTAGTTTCCTCAACCATTAAAAAC
TCAAGTATCCCAGAAAGATTGGTATTTCATATAGTTACTGATAAGAAGACATACACCGCG
ATGCATGCATGGTTTGCCGTGAACTCAGTTAATTTAGCTGTCCTGGAAGTAAGAGGATTG
CATCAGTTTGATTGGTCTCATGAGGTGAATATCGGGATTAAGGAGATGATAGAGATCCAT
CGATTAATCTGTAGACACAAATTTGACCGCATGAAGAGGGAAACTTTGGCAAACGAGTAT
GAAAATGATAAGGATTTGCAGTATCTACGGCCTAGCTGTGCATCCCTTTTGAATCATCTG
CGCATCTATATCCCTGAGCTCTTTCCAGATCTGAACAAGATTATATTTTTGGACGATGAT
ACTGTAGTACAGCATGATTTATCATCTCTATGGGAACTGGATCTCAACGGGAAAGTTGTT
GGTGCAGCTTTTGACTCGGGCTGTGGAGATGGCTGTTGCCCTGGAAGAAAGTACAAAGAT
TACTTCAACTTTACGAGCCCTGTTATATCATCTAACCTGGATTATGATCGTTGTGGATGG
CTTTATGGAATGAATGTCTTTGATCTTCAAGCTTGGAGAAAGACTAACATCACTGCGACT
TACCATCACTGGCTTAAACTTAGTCTCAACTCTGGTTTTGAACTGTGGAATCCTGGAGCA
CTTCCACCTTCCCTGATTGCTTTTGAGGGTCATGTGCATTGGATTGAACCTTCGTGGCAC
ATTGCTGGTTTAGGTTATCGATCTGTTATGAATGTCACAGAGTCTATACTGGAGAACGTA
GCTGTTGTACATTTCAGTGGACCAGCCAAGCCATGGCTTGAGATTGGGAGCCCTGAGATA
CGAAGCTTATGGAGTCGCCATGTAAATTTCTCAAACGAATACATTAGGAAATGTGGAATC
ATGGGGTGA

Peptide Sequence

PEP ID

XP_016471042.1
PEP Infomation

PREDICTED: probable galacturonosyltransferase 15 isoform X2 [Nicotiana tabacum]
Sequence

MLALVEATSDGENGKGGIESSTSLPSSFNDLVKDMTSSGQDIKAFAFKTKAMIVKMEKLV
ESARQRESIFWHLASHGVPKGIHCLSLKLAEEYAENAAARSRLPPPQYVSRLTDPSFHHV
VLLTDNVLAASVVVSSTIKNSSIPERLVFHIVTDKKTYTAMHAWFAVNSVNLAVLEVRGL
HQFDWSHEVNIGIKEMIEIHRLICRHKFDRMKRETLANEYENDKDLQYLRPSCASLLNHL
RIYIPELFPDLNKIIFLDDDTVVQHDLSSLWELDLNGKVVGAAFDSGCGDGCCPGRKYKD
YFNFTSPVISSNLDYDRCGWLYGMNVFDLQAWRKTNITATYHHWLKLSLNSGFELWNPGA
LPPSLIAFEGHVHWIEPSWHIAGLGYRSVMNVTESILENVAVVHFSGPAKPWLEIGSPEI
RSLWSRHVNFSNEYIRKCGIMG

Transcript Sequence

Gene sequence data has not been registered.